STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahctf1Protein ELYS. (1483 aa)    
Predicted Functional Partners:
Nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.995
T11_10629
Uncharacterized protein.
   
 0.994
NUP98
Nuclear pore complex protein Nup98-Nup96.
   
 0.993
NUP160
Nuclear pore complex protein.
   
 0.993
Sec13
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
    
 0.993
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.988
Nup155
Nuclear pore complex protein.
   
 0.984
NUP93
Nuclear pore complex protein Nup93.
    
 0.980
NUP205
Nuclear pore complex protein.
   
 0.978
NUP35
Nucleoporin NUP53.
    
 0.970
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.