Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DHFR | HOOK1 | A0A0V1HKX6 | A0A0V1I152 | Dihydrofolate reductase. | Protein Hook-like protein 1. | 0.544 |
Egfr | HOOK1 | A0A0V1HEW6 | A0A0V1I152 | Receptor protein-tyrosine kinase. | Protein Hook-like protein 1. | 0.531 |
Egfr | lrk-1 | A0A0V1HEW6 | A0A0V1HSX4 | Receptor protein-tyrosine kinase. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.994 |
HOOK1 | DHFR | A0A0V1I152 | A0A0V1HKX6 | Protein Hook-like protein 1. | Dihydrofolate reductase. | 0.544 |
HOOK1 | Egfr | A0A0V1I152 | A0A0V1HEW6 | Protein Hook-like protein 1. | Receptor protein-tyrosine kinase. | 0.531 |
HOOK1 | MCM4 | A0A0V1I152 | A0A0V1I6E1 | Protein Hook-like protein 1. | DNA helicase; Belongs to the MCM family. | 0.590 |
HOOK1 | NFIC | A0A0V1I152 | A0A0V1GZX0 | Protein Hook-like protein 1. | Nuclear factor 1 C-type. | 0.502 |
HOOK1 | Otud7b | A0A0V1I152 | A0A0V1H1P7 | Protein Hook-like protein 1. | OTU domain-containing protein 7B. | 0.483 |
HOOK1 | PPP2R2D | A0A0V1I152 | A0A0V1HTR5 | Protein Hook-like protein 1. | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. | 0.506 |
HOOK1 | T11_10292 | A0A0V1I152 | A0A0V1I3I3 | Protein Hook-like protein 1. | Uncharacterized protein. | 0.629 |
HOOK1 | T11_15902 | A0A0V1I152 | A0A0V1I2Z6 | Protein Hook-like protein 1. | Serine/threonine-protein kinase PLK4. | 0.485 |
HOOK1 | lrk-1 | A0A0V1I152 | A0A0V1HSX4 | Protein Hook-like protein 1. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.798 |
HOOK1 | prkdc | A0A0V1I152 | A0A0V1I3W2 | Protein Hook-like protein 1. | DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. | 0.508 |
MCM4 | HOOK1 | A0A0V1I6E1 | A0A0V1I152 | DNA helicase; Belongs to the MCM family. | Protein Hook-like protein 1. | 0.590 |
MCM4 | T11_15902 | A0A0V1I6E1 | A0A0V1I2Z6 | DNA helicase; Belongs to the MCM family. | Serine/threonine-protein kinase PLK4. | 0.557 |
MCM4 | prkdc | A0A0V1I6E1 | A0A0V1I3W2 | DNA helicase; Belongs to the MCM family. | DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. | 0.404 |
NFIC | HOOK1 | A0A0V1GZX0 | A0A0V1I152 | Nuclear factor 1 C-type. | Protein Hook-like protein 1. | 0.502 |
Otud7b | HOOK1 | A0A0V1H1P7 | A0A0V1I152 | OTU domain-containing protein 7B. | Protein Hook-like protein 1. | 0.483 |
Otud7b | lrk-1 | A0A0V1H1P7 | A0A0V1HSX4 | OTU domain-containing protein 7B. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.953 |
PPP2R2D | HOOK1 | A0A0V1HTR5 | A0A0V1I152 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. | Protein Hook-like protein 1. | 0.506 |
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