STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbp-1Protein cbp-1. (313 aa)    
Predicted Functional Partners:
CREBBP
CREB-binding protein.
 
     0.945
foxo
Forkhead box protein O.
   
 0.765
Kat2a
Histone acetyltransferase KAT2A.
    
 0.733
Kmt2b
Histone-lysine N-methyltransferase 2B.
   
 0.730
CREB1
Cyclic AMP-responsive element-binding protein 1.
    
 0.717
JTB
Nuclear receptor coactivator 2.
   
 0.715
carm1
Histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.713
hif-1
Hypoxia-inducible factor 1.
    
 0.701
ercc5
DNA repair protein-like protein.
   
 0.683
sta-1
Signal transducer and activator of transcription.
    
 0.680
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.