STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T11_830Putative serine/threonine-protein kinase. (721 aa)    
Predicted Functional Partners:
Ltv1
Protein LTV1-like protein.
    
 0.604
Riok2
Serine/threonine-protein kinase RIO2.
    
 0.563
cct-8
T-complex protein 1 subunit theta.
    
 0.542
rps3-a
40S ribosomal protein S3-A.
    
 0.530
RpS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.518
Gcc1
GRIP and coiled-coil domain-containing protein 1.
    
 0.516
RpS15Aa
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
    
  0.506
rps20
40S ribosomal protein S20.
    
 0.505
dvl3
Segment polarity protein dishevelled-like protein DVL-3.
    
  0.500
Per3
Period circadian-like protein 3.
    
 0.495
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.