STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpeb4-4Cytoplasmic polyadenylation element-binding protein 4. (378 aa)    
Predicted Functional Partners:
cpeb4-3
Cytoplasmic polyadenylation element-binding protein 4.
  
     0.539
cpb-1
Cytoplasmic polyadenylation element-binding protein 1.
  
     0.536
cpeb4
Cytoplasmic polyadenylation element-binding protein 4.
  
     0.536
cpeb4-2
Cytoplasmic polyadenylation element-binding protein 4.
  
     0.536
SYT1
Synaptotagmin-1.
  
     0.451
SYT7
Synaptotagmin-7.
  
     0.450
orb2
Putative RNA-binding protein orb2.
  
     0.444
RARA
Retinoic acid receptor alpha.
  
   
 0.439
SYT12-2
Synaptotagmin-12.
  
     0.435
vvl
POU domain protein CF1A.
  
     0.434
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.