STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPHOSPH10U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (611 aa)    
Predicted Functional Partners:
Sas10
Something about silencing protein 10.
   
 
 0.999
bms1
Ribosome biogenesis protein bms1.
   
 
 0.999
Imp4
U3 small nucleolar ribonucleoprotein IMP4.
   
 0.999
WDR43
WD repeat-containing protein 43.
   
 0.999
dpy-5-2
U3 small nucleolar RNA-associated protein 6-like protein.
   
 
 0.999
PWP2
Periodic tryptophan protein 2-like protein.
   
 
 0.999
wdr75
WD repeat-containing protein 75.
   
 0.999
nol6
Nucleolar protein 6.
   
 0.999
UTP15
U3 small nucleolar RNA-associated protein 15-like protein.
   
 0.999
Utp18
U3 small nucleolar RNA-associated protein 18-like protein.
   
 0.999
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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