STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T11_9455Uncharacterized protein. (310 aa)    
Predicted Functional Partners:
meaf6
Chromatin modification-related protein MEAF6.
    
 0.705
BRPF1
Peregrin.
    
 0.636
taf6
Transcription initiation factor TFIID subunit 6.
    
 0.604
Nipped-A
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
   
 0.582
Epc1
Enhancer of polycomb-like protein 1.
    
 0.554
DMAP1
DNA methyltransferase 1-associated protein 1.
    
 0.540
tp53
Cellular tumor antigen p53.
    
 0.510
TAF1
Transcription initiation factor TFIID subunit 1.
    
 0.510
hsp-12.2-2
Transcription initiation factor TFIID subunit 2.
    
 0.496
HAG4
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.479
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.