STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AntpHomeotic protein antennapedia. (313 aa)    
Predicted Functional Partners:
hoxb5
Homeobox-like protein.
  
 
0.894
exd
Homeobox protein extradenticle.
    
 0.858
nhr-25
Nuclear hormone receptor family member nhr-25.
    
 0.757
MEIS2
Homeobox protein Meis2.
   
 0.695
Abd-B
Homeobox protein abdominal-B.
   
 
0.631
HOXA7
Homeobox protein Hox-A7.
  
 
0.631
prkdc
DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 
 0.585
Xrcc5
X-ray repair cross-complementing protein 5.
    
 
 0.581
Twist2
Twist-related protein 2.
   
 
 0.489
pax3
Paired box protein Pax-3.
   
0.474
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.