STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lgmn-2Legumain. (464 aa)    
Predicted Functional Partners:
T11_10194
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
     
0.650
Ctsz
Cathepsin Z; Belongs to the peptidase C1 family.
   
 
 0.547
cpr-1
Gut-specific cysteine proteinase; Belongs to the peptidase C1 family.
   
 
 0.547
CTSC
Dipeptidyl peptidase 1; Belongs to the peptidase C1 family.
   
 
 0.509
CUBN
Cubilin.
     
 0.465
Apaf1
Apoptotic protease-activating factor 1.
    
 
 0.456
CSTB
Cystatin-B.
    
 
 0.434
cpr-6
Cathepsin B-like cysteine proteinase 6; Belongs to the peptidase C1 family.
   
 
 0.419
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.