STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REXO2Oligoribonuclease, mitochondrial. (202 aa)    
Predicted Functional Partners:
T11_15766
Putative RNA exonuclease NEF-sp.
   
 0.895
sup-10
RNA exonuclease 1-like protein.
   
 0.895
Rexo4
RNA exonuclease 4.
   
 0.774
TRNT1
CCA tRNA nucleotidyltransferase 1, mitochondrial; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
     
 0.642
TREX2
Three prime repair exonuclease 2.
   
 0.612
Exosc10
Exosome component 10.
   
 
 0.612
PAN2
PAB-dependent poly(A)-specific ribonuclease subunit 2.
   
 0.612
Exosc4
Exosome complex component RRP41.
   
  
 0.590
JhI-1
Ribonuclease Z, mitochondrial.
      
 0.566
BPNT1
3'(2'),5'-bisphosphate nucleotidase 1.
      
 0.566
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.