STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cah-2Putative carbonic anhydrase-like protein 2; Belongs to the alpha-carbonic anhydrase family. (345 aa)    
Predicted Functional Partners:
Rpf2
Ribosome production factor 2-like protein.
   
 
 0.774
Grwd1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.681
Utp18
U3 small nucleolar RNA-associated protein 18-like protein.
   
  
 0.669
Ppan
Suppressor of SWI4 1-like protein.
   
    0.656
RpL5
60S ribosomal protein L5.
    
 
 0.650
WDR43
WD repeat-containing protein 43.
   
    0.644
PWP2
Periodic tryptophan protein 2-like protein.
   
    0.637
RRP12
RRP12-like protein.
   
  
 0.636
T11_7584
Pumilio domain-containing protein-like protein.
   
  
 0.632
SDAD1
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.630
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.