STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rps3a40S ribosomal protein S3a. (267 aa)    
Predicted Functional Partners:
mrpl15
39S ribosomal protein L15, mitochondrial.
   
 
 0.999
RpL30
60S ribosomal protein L30.
   
 
 0.999
RpL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 
 0.999
rpl-26
60S ribosomal protein L26.
   
 0.999
Rpl34
60S ribosomal protein L34.
   
 
 0.999
T11_15514
Uncharacterized protein.
   
 
 0.999
RPL18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 
 0.999
RPS4
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.999
RPS23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.999
rpl-7
60S ribosomal protein L7.
   
 
 0.999
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.