STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XA68_16908Ubiquitin carboxyl-terminal hydrolase. (316 aa)    
Predicted Functional Partners:
XA68_12920
RPN13_C domain-containing protein.
    
 0.936
XA68_18317
VWFA domain-containing protein.
    
 0.934
XA68_14946
PCI domain-containing protein.
   
 0.927
XA68_13996
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.915
XA68_13307
Proteasome subunit alpha type.
   
 0.910
XA68_11968
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.909
XA68_15269
PCI domain-containing protein.
   
 0.909
XA68_10621
MPN domain-containing protein.
   
 0.908
XA68_12209
PCI domain-containing protein.
   
 0.906
XA68_17869
PCI domain-containing protein.
   
 0.902
Your Current Organism:
Ophiocordyceps unilateralis
NCBI taxonomy Id: 268505
Other names: Cordyceps unilateralis, O. unilateralis
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