STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XA68_16139UPF0020 domain-containing protein. (481 aa)    
Predicted Functional Partners:
XA68_15718
Uncharacterized protein.
   
 0.978
XA68_11016
Deacetylase sirtuin-type domain-containing protein.
    
 0.905
XA68_18353
WD_REPEATS_REGION domain-containing protein.
   
    0.846
XA68_12304
Uncharacterized protein.
   
  
 0.804
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.783
XA68_13726
Uncharacterized protein.
   
    0.764
XA68_15320
Brix domain-containing protein.
   
    0.761
XA68_11512
Uncharacterized protein.
   
    0.741
XA68_16152
Brix domain-containing protein.
   
    0.725
XA68_15138
WD_REPEATS_REGION domain-containing protein.
   
    0.719
Your Current Organism:
Ophiocordyceps unilateralis
NCBI taxonomy Id: 268505
Other names: Cordyceps unilateralis, O. unilateralis
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