XA68_12756 protein (Ophiocordyceps unilateralis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

XA68_12756

Uncharacterized protein. (490 aa)

Predicted Functional Partners:

XA68_10766

0.567

XA68_17347

0.515

XA68_10665

0.483

XA68_11810

0.470

XA68_11937

0.459

XA68_13787

0.443

XA68_13830

0.438

XA68_15681

0.436

XA68_17146

0.433

XA68_12837

0.433

Your Current Organism:

Ophiocordyceps unilateralis

NCBI taxonomy Id: 268505
Other names: Cordyceps unilateralis, O. unilateralis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
XA68_10665	XA68_12756	A0A2A9PGU2	A0A2A9PE27	Erf4 domain-containing protein.	Uncharacterized protein.	0.483
XA68_10766	XA68_11937	A0A2A9PHR0	A0A2A9PFR4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	WSC domain-containing protein.	0.560
XA68_10766	XA68_12756	A0A2A9PHR0	A0A2A9PE27	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.567
XA68_11810	XA68_12756	A0A2A9PN58	A0A2A9PE27	MPN domain-containing protein.	Uncharacterized protein.	0.470
XA68_11810	XA68_12837	A0A2A9PN58	A0A2A9PDS8	MPN domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.765
XA68_11810	XA68_13787	A0A2A9PN58	A0A2A9PU36	MPN domain-containing protein.	Ubiquitin-like domain-containing protein.	0.770
XA68_11810	XA68_13830	A0A2A9PN58	A0A2A9PMW3	MPN domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.504
XA68_11810	XA68_17146	A0A2A9PN58	A0A2A9P4Y7	MPN domain-containing protein.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.765
XA68_11937	XA68_10766	A0A2A9PFR4	A0A2A9PHR0	WSC domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.560
XA68_11937	XA68_12756	A0A2A9PFR4	A0A2A9PE27	WSC domain-containing protein.	Uncharacterized protein.	0.459
XA68_11937	XA68_13830	A0A2A9PFR4	A0A2A9PMW3	WSC domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.446
XA68_11937	XA68_15681	A0A2A9PFR4	A0A2A9P7V5	WSC domain-containing protein.	Uncharacterized protein.	0.446
XA68_12756	XA68_10665	A0A2A9PE27	A0A2A9PGU2	Uncharacterized protein.	Erf4 domain-containing protein.	0.483
XA68_12756	XA68_10766	A0A2A9PE27	A0A2A9PHR0	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.567
XA68_12756	XA68_11810	A0A2A9PE27	A0A2A9PN58	Uncharacterized protein.	MPN domain-containing protein.	0.470
XA68_12756	XA68_11937	A0A2A9PE27	A0A2A9PFR4	Uncharacterized protein.	WSC domain-containing protein.	0.459
XA68_12756	XA68_12837	A0A2A9PE27	A0A2A9PDS8	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.433
XA68_12756	XA68_13787	A0A2A9PE27	A0A2A9PU36	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.443
XA68_12756	XA68_13830	A0A2A9PE27	A0A2A9PMW3	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.438
XA68_12756	XA68_15681	A0A2A9PE27	A0A2A9P7V5	Uncharacterized protein.	Uncharacterized protein.	0.436