STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XA68_17056Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (340 aa)    
Predicted Functional Partners:
XA68_18301
CMP/dCMP-type deaminase domain-containing protein.
 
  
 
 0.906
XA68_15770
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.836
XA68_17575
RNase H domain-containing protein.
  
  
 
0.751
XA68_10111
Nudix hydrolase domain-containing protein.
   
  0.654
XA68_14156
Glyceraldehyde-3-phosphate dehydrogenase.
     
 0.613
XA68_11478
Nucleoside diphosphate kinase.
     
 0.603
XA68_12439
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.592
XA68_10657
Uncharacterized protein.
   
 
 0.576
XA68_18132
Flavoprotein domain-containing protein.
  
 
 0.561
XA68_11885
Thymidylat_synt domain-containing protein.
    
 0.498
Your Current Organism:
Ophiocordyceps unilateralis
NCBI taxonomy Id: 268505
Other names: Cordyceps unilateralis, O. unilateralis
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