STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XA68_16372Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
XA68_15729
RPOL4c domain-containing protein.
   
 0.999
XA68_15757
RNA_pol_L_2 domain-containing protein.
   
 0.998
XA68_11812
Uncharacterized protein.
   
 0.998
XA68_10865
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.997
XA68_16720
Uncharacterized protein.
   
 0.997
XA68_16397
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.997
XA68_12970
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.997
XA68_10342
RPOLD domain-containing protein.
   
 0.997
XA68_17094
Uncharacterized protein.
   
 0.997
XA68_15644
Uncharacterized protein.
   
 0.997
Your Current Organism:
Ophiocordyceps unilateralis
NCBI taxonomy Id: 268505
Other names: Cordyceps unilateralis, O. unilateralis
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