Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Nmlp_1156 | Nmlp_1350 | PHP domain protein. | DoxX domain protein. | 0.508 |
Nmlp_1156 | Nmlp_1808 | PHP domain protein. | RIO-type protein kinase domain protein. | 0.681 |
Nmlp_1156 | Nmlp_2086 | PHP domain protein. | Probable S-adenosylmethionine-dependent methyltransferase. | 0.528 |
Nmlp_1156 | Nmlp_3457 | PHP domain protein. | DUF447 family protein. | 0.644 |
Nmlp_1350 | Nmlp_1156 | DoxX domain protein. | PHP domain protein. | 0.508 |
Nmlp_1350 | Nmlp_1808 | DoxX domain protein. | RIO-type protein kinase domain protein. | 0.502 |
Nmlp_1350 | Nmlp_2086 | DoxX domain protein. | Probable S-adenosylmethionine-dependent methyltransferase. | 0.405 |
Nmlp_1350 | Nmlp_2294 | DoxX domain protein. | Homolog to carboxylate-amine ligase. | 0.402 |
Nmlp_1350 | Nmlp_2998 | DoxX domain protein. | APH family phosphotransferase. | 0.451 |
Nmlp_1350 | Nmlp_3457 | DoxX domain protein. | DUF447 family protein. | 0.558 |
Nmlp_1808 | Nmlp_1156 | RIO-type protein kinase domain protein. | PHP domain protein. | 0.681 |
Nmlp_1808 | Nmlp_1350 | RIO-type protein kinase domain protein. | DoxX domain protein. | 0.502 |
Nmlp_1808 | Nmlp_2086 | RIO-type protein kinase domain protein. | Probable S-adenosylmethionine-dependent methyltransferase. | 0.673 |
Nmlp_1808 | Nmlp_3457 | RIO-type protein kinase domain protein. | DUF447 family protein. | 0.718 |
Nmlp_2086 | Nmlp_1156 | Probable S-adenosylmethionine-dependent methyltransferase. | PHP domain protein. | 0.528 |
Nmlp_2086 | Nmlp_1350 | Probable S-adenosylmethionine-dependent methyltransferase. | DoxX domain protein. | 0.405 |
Nmlp_2086 | Nmlp_1808 | Probable S-adenosylmethionine-dependent methyltransferase. | RIO-type protein kinase domain protein. | 0.673 |
Nmlp_2086 | Nmlp_3457 | Probable S-adenosylmethionine-dependent methyltransferase. | DUF447 family protein. | 0.608 |
Nmlp_2294 | Nmlp_1350 | Homolog to carboxylate-amine ligase. | DoxX domain protein. | 0.402 |
Nmlp_2294 | Nmlp_2998 | Homolog to carboxylate-amine ligase. | APH family phosphotransferase. | 0.605 |
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