Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Nmlp_1446 | Nmlp_1447 | Nmlp_1446 | Nmlp_1447 | Probable PAP2-type phosphatase. | UPF0761 family protein. | 0.826 |
| Nmlp_1446 | Nmlp_1448 | Nmlp_1446 | Nmlp_1448 | Probable PAP2-type phosphatase. | Pantoate kinase. | 0.479 |
| Nmlp_1446 | ftsY | Nmlp_1446 | Nmlp_1443 | Probable PAP2-type phosphatase. | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.526 |
| Nmlp_1446 | pfdA | Nmlp_1446 | Nmlp_1444 | Probable PAP2-type phosphatase. | Prefoldin alpha subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | 0.526 |
| Nmlp_1446 | rpl20e | Nmlp_1446 | Nmlp_1445 | Probable PAP2-type phosphatase. | 50S ribosomal protein L20e. | 0.526 |
| Nmlp_1447 | Nmlp_1446 | Nmlp_1447 | Nmlp_1446 | UPF0761 family protein. | Probable PAP2-type phosphatase. | 0.826 |
| Nmlp_1447 | Nmlp_1448 | Nmlp_1447 | Nmlp_1448 | UPF0761 family protein. | Pantoate kinase. | 0.479 |
| Nmlp_1447 | ftsY | Nmlp_1447 | Nmlp_1443 | UPF0761 family protein. | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.526 |
| Nmlp_1447 | pfdA | Nmlp_1447 | Nmlp_1444 | UPF0761 family protein. | Prefoldin alpha subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | 0.526 |
| Nmlp_1447 | rpl20e | Nmlp_1447 | Nmlp_1445 | UPF0761 family protein. | 50S ribosomal protein L20e. | 0.526 |
| Nmlp_1448 | Nmlp_1446 | Nmlp_1448 | Nmlp_1446 | Pantoate kinase. | Probable PAP2-type phosphatase. | 0.479 |
| Nmlp_1448 | Nmlp_1447 | Nmlp_1448 | Nmlp_1447 | Pantoate kinase. | UPF0761 family protein. | 0.479 |
| Nmlp_1448 | pfdA | Nmlp_1448 | Nmlp_1444 | Pantoate kinase. | Prefoldin alpha subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | 0.442 |
| ftsY | Nmlp_1446 | Nmlp_1443 | Nmlp_1446 | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | Probable PAP2-type phosphatase. | 0.526 |
| ftsY | Nmlp_1447 | Nmlp_1443 | Nmlp_1447 | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | UPF0761 family protein. | 0.526 |
| ftsY | pfdA | Nmlp_1443 | Nmlp_1444 | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | Prefoldin alpha subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | 0.857 |
| ftsY | rpl20e | Nmlp_1443 | Nmlp_1445 | Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 50S ribosomal protein L20e. | 0.948 |
| pfdA | Nmlp_1446 | Nmlp_1444 | Nmlp_1446 | Prefoldin alpha subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | Probable PAP2-type phosphatase. | 0.526 |
| pfdA | Nmlp_1447 | Nmlp_1444 | Nmlp_1447 | Prefoldin alpha subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | UPF0761 family protein. | 0.526 |
| pfdA | Nmlp_1448 | Nmlp_1444 | Nmlp_1448 | Prefoldin alpha subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | Pantoate kinase. | 0.442 |
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