Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nmlp_1890 | pcc1 | Nmlp_1890 | Nmlp_1887 | DUF2103 family protein. | KEOPS complex subunit Pcc1. | 0.701 |
Nmlp_1890 | rpl43e | Nmlp_1890 | Nmlp_1889 | DUF2103 family protein. | 50S ribosomal protein L43e. | 0.712 |
Nmlp_1890 | rpoP | Nmlp_1890 | Nmlp_1888 | DUF2103 family protein. | DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.694 |
Nmlp_1890 | truD | Nmlp_1890 | Nmlp_1891 | DUF2103 family protein. | tRNA pseudouridine(13) synthase TruD; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.700 |
kae1 | pcc1 | Nmlp_1551 | Nmlp_1887 | KEOPS complex subunit Kae1/Bud32; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the N-terminal section; belongs to the KAE1 / TsaD family. | KEOPS complex subunit Pcc1. | 0.517 |
pcc1 | Nmlp_1890 | Nmlp_1887 | Nmlp_1890 | KEOPS complex subunit Pcc1. | DUF2103 family protein. | 0.701 |
pcc1 | kae1 | Nmlp_1887 | Nmlp_1551 | KEOPS complex subunit Pcc1. | KEOPS complex subunit Kae1/Bud32; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the N-terminal section; belongs to the KAE1 / TsaD family. | 0.517 |
pcc1 | pfdB | Nmlp_1887 | Nmlp_3773 | KEOPS complex subunit Pcc1. | Prefoldin beta subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | 0.440 |
pcc1 | rpl43e | Nmlp_1887 | Nmlp_1889 | KEOPS complex subunit Pcc1. | 50S ribosomal protein L43e. | 0.857 |
pcc1 | rpoP | Nmlp_1887 | Nmlp_1888 | KEOPS complex subunit Pcc1. | DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.961 |
pcc1 | truD | Nmlp_1887 | Nmlp_1891 | KEOPS complex subunit Pcc1. | tRNA pseudouridine(13) synthase TruD; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.426 |
pfdB | pcc1 | Nmlp_3773 | Nmlp_1887 | Prefoldin beta subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | KEOPS complex subunit Pcc1. | 0.440 |
pfdB | rpl43e | Nmlp_3773 | Nmlp_1889 | Prefoldin beta subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | 50S ribosomal protein L43e. | 0.651 |
pfdB | rpoP | Nmlp_3773 | Nmlp_1888 | Prefoldin beta subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.836 |
rpl43e | Nmlp_1890 | Nmlp_1889 | Nmlp_1890 | 50S ribosomal protein L43e. | DUF2103 family protein. | 0.712 |
rpl43e | pcc1 | Nmlp_1889 | Nmlp_1887 | 50S ribosomal protein L43e. | KEOPS complex subunit Pcc1. | 0.857 |
rpl43e | pfdB | Nmlp_1889 | Nmlp_3773 | 50S ribosomal protein L43e. | Prefoldin beta subunit; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | 0.651 |
rpl43e | rpoP | Nmlp_1889 | Nmlp_1888 | 50S ribosomal protein L43e. | DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.865 |
rpl43e | truD | Nmlp_1889 | Nmlp_1891 | 50S ribosomal protein L43e. | tRNA pseudouridine(13) synthase TruD; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.433 |
rpoP | Nmlp_1890 | Nmlp_1888 | Nmlp_1890 | DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | DUF2103 family protein. | 0.694 |
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