STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtl5Probable glycosyltransferase, type 2. (375 aa)    
Predicted Functional Partners:
pth
peptidyl-tRNA hydrolase.
  
    0.652
Nmlp_1895
Homolog to NAD-dependent epimerase/dehydratase.
  
  
 0.608
Nmlp_1896
Uncharacterized protein.
       0.548
Nmlp_1901
Type IV pilus biogenesis complex membrane subunit.
 
     0.496
Nmlp_1897
Uncharacterized protein.
       0.451
Nmlp_1898
Uncharacterized protein.
       0.451
Nmlp_1899
Uncharacterized protein.
       0.451
Nmlp_1900
Uncharacterized protein.
       0.451
Nmlp_2533
DnaK domain protein / protein kinase domain protein; Gene has a frameshift; locus_tag: Nmlp_2532; product: ISH4-type transposase NmIRS7 (nonfunctional); conceptual translation after in silico reconstruction: MFPIRRFVSESAAADLLQQVRWRDGVECPRCRSDLTVRNGSYR VYQRYLCENCGRTFNEKTGTIFAHAKLSLKEWYFTIYVFLRFNTSIRQIEAELNLSYR TVRRRVERFARALDSPSIRLSGPVEIDEVYVSAGLKGRERDSSRSRGLSTRGRGSYDG DKPPVFTLVDRGSDDRYVVPAKSAEESTIRLLLANCEQESITVYTDGFQAYEPLEDDA FTREYVVHGDGEYADGDIHVNTCESHASLTRRWLSPHRGVSKDKLTPYLRSFQLRCEL YRKRGDEALKHAFDAAL.
  
 
 0.451
Nmlp_1902
Type IV pilus biogenesis complex ATPase subunit.
  
    0.430
Your Current Organism:
Natronomonas moolapensis
NCBI taxonomy Id: 268739
Other names: N. moolapensis 8.8.11, Natronomonas moolapensis 8.8.11, Natronomonas moolapensis DSM 18674, Natronomonas moolapensis JCM 14361, Natronomonas moolapensis str. 8.8.11, Natronomonas moolapensis strain 8.8.11, haloarchaeon CSW8.8.11
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