Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nmlp_1976 | Nmlp_1977 | Nmlp_1976 | Nmlp_1977 | RimK family protein. | AstE domain protein. | 0.874 |
Nmlp_1976 | Nmlp_2193 | Nmlp_1976 | Nmlp_2193 | RimK family protein. | ATP-grasp fold protein. | 0.748 |
Nmlp_1976 | sdhB | Nmlp_1976 | Nmlp_1980 | RimK family protein. | Succinate dehydrogenase subunit B; Deleted EC_number 1.3.99.1. | 0.410 |
Nmlp_1976 | sdhC | Nmlp_1976 | Nmlp_1978 | RimK family protein. | Succinate dehydrogenase subunit C; Deleted EC_number 1.3.99.1. | 0.427 |
Nmlp_1976 | sdhD | Nmlp_1976 | Nmlp_1979 | RimK family protein. | Succinate dehydrogenase subunit D; Deleted EC_number 1.3.99.1. | 0.410 |
Nmlp_1977 | Nmlp_1976 | Nmlp_1977 | Nmlp_1976 | AstE domain protein. | RimK family protein. | 0.874 |
Nmlp_1977 | Nmlp_2193 | Nmlp_1977 | Nmlp_2193 | AstE domain protein. | ATP-grasp fold protein. | 0.682 |
Nmlp_1977 | argX | Nmlp_1977 | Nmlp_1243 | AstE domain protein. | Probable glutamate--argW ligase. | 0.453 |
Nmlp_1977 | sdhA1 | Nmlp_1977 | Nmlp_1981 | AstE domain protein. | Succinate dehydrogenase subunit A; Deleted EC_number 1.3.99.1. | 0.613 |
Nmlp_1977 | sdhB | Nmlp_1977 | Nmlp_1980 | AstE domain protein. | Succinate dehydrogenase subunit B; Deleted EC_number 1.3.99.1. | 0.653 |
Nmlp_1977 | sdhC | Nmlp_1977 | Nmlp_1978 | AstE domain protein. | Succinate dehydrogenase subunit C; Deleted EC_number 1.3.99.1. | 0.647 |
Nmlp_1977 | sdhD | Nmlp_1977 | Nmlp_1979 | AstE domain protein. | Succinate dehydrogenase subunit D; Deleted EC_number 1.3.99.1. | 0.647 |
Nmlp_2193 | Nmlp_1976 | Nmlp_2193 | Nmlp_1976 | ATP-grasp fold protein. | RimK family protein. | 0.748 |
Nmlp_2193 | Nmlp_1977 | Nmlp_2193 | Nmlp_1977 | ATP-grasp fold protein. | AstE domain protein. | 0.682 |
argX | Nmlp_1977 | Nmlp_1243 | Nmlp_1977 | Probable glutamate--argW ligase. | AstE domain protein. | 0.453 |
sdhA1 | Nmlp_1977 | Nmlp_1981 | Nmlp_1977 | Succinate dehydrogenase subunit A; Deleted EC_number 1.3.99.1. | AstE domain protein. | 0.613 |
sdhA1 | sdhB | Nmlp_1981 | Nmlp_1980 | Succinate dehydrogenase subunit A; Deleted EC_number 1.3.99.1. | Succinate dehydrogenase subunit B; Deleted EC_number 1.3.99.1. | 0.999 |
sdhA1 | sdhC | Nmlp_1981 | Nmlp_1978 | Succinate dehydrogenase subunit A; Deleted EC_number 1.3.99.1. | Succinate dehydrogenase subunit C; Deleted EC_number 1.3.99.1. | 0.999 |
sdhA1 | sdhD | Nmlp_1981 | Nmlp_1979 | Succinate dehydrogenase subunit A; Deleted EC_number 1.3.99.1. | Succinate dehydrogenase subunit D; Deleted EC_number 1.3.99.1. | 0.997 |
sdhB | Nmlp_1976 | Nmlp_1980 | Nmlp_1976 | Succinate dehydrogenase subunit B; Deleted EC_number 1.3.99.1. | RimK family protein. | 0.410 |
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