Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nmlp_2145 | Nmlp_2476 | Nmlp_2145 | Nmlp_2476 | PRC domain protein. | DUF293 domain protein. | 0.619 |
Nmlp_2145 | Nmlp_2897 | Nmlp_2145 | Nmlp_2897 | PRC domain protein. | DUF460 domain protein. | 0.648 |
Nmlp_2145 | Nmlp_2975 | Nmlp_2145 | Nmlp_2975 | PRC domain protein. | arNOG05395 family transcription regulator. | 0.511 |
Nmlp_2145 | Nmlp_3393 | Nmlp_2145 | Nmlp_3393 | PRC domain protein. | DUF106 family protein. | 0.506 |
Nmlp_2145 | Nmlp_3833 | Nmlp_2145 | Nmlp_3833 | PRC domain protein. | ACT domain protein. | 0.474 |
Nmlp_2145 | cofC | Nmlp_2145 | Nmlp_2440 | PRC domain protein. | 2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family. | 0.693 |
Nmlp_2145 | dpd | Nmlp_2145 | Nmlp_3455 | PRC domain protein. | Putative dihydropyrimidine dehydrogenase. | 0.510 |
Nmlp_2145 | oapB | Nmlp_2145 | Nmlp_1002 | PRC domain protein. | Origin-associated protein OapB. | 0.713 |
Nmlp_2476 | Nmlp_2145 | Nmlp_2476 | Nmlp_2145 | DUF293 domain protein. | PRC domain protein. | 0.619 |
Nmlp_2476 | Nmlp_2897 | Nmlp_2476 | Nmlp_2897 | DUF293 domain protein. | DUF460 domain protein. | 0.635 |
Nmlp_2476 | Nmlp_2975 | Nmlp_2476 | Nmlp_2975 | DUF293 domain protein. | arNOG05395 family transcription regulator. | 0.684 |
Nmlp_2476 | Nmlp_3393 | Nmlp_2476 | Nmlp_3393 | DUF293 domain protein. | DUF106 family protein. | 0.624 |
Nmlp_2476 | Nmlp_3833 | Nmlp_2476 | Nmlp_3833 | DUF293 domain protein. | ACT domain protein. | 0.670 |
Nmlp_2476 | cgi121 | Nmlp_2476 | Nmlp_3931 | DUF293 domain protein. | KEOPS complex subunit Cgi121. | 0.637 |
Nmlp_2476 | cofC | Nmlp_2476 | Nmlp_2440 | DUF293 domain protein. | 2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family. | 0.735 |
Nmlp_2476 | dpd | Nmlp_2476 | Nmlp_3455 | DUF293 domain protein. | Putative dihydropyrimidine dehydrogenase. | 0.627 |
Nmlp_2476 | oapB | Nmlp_2476 | Nmlp_1002 | DUF293 domain protein. | Origin-associated protein OapB. | 0.735 |
Nmlp_2476 | rnp3 | Nmlp_2476 | Nmlp_2366 | DUF293 domain protein. | Ribonuclease P protein component 3; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | 0.691 |
Nmlp_2897 | Nmlp_2145 | Nmlp_2897 | Nmlp_2145 | DUF460 domain protein. | PRC domain protein. | 0.648 |
Nmlp_2897 | Nmlp_2476 | Nmlp_2897 | Nmlp_2476 | DUF460 domain protein. | DUF293 domain protein. | 0.635 |
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