Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Nmlp_3169 | ilvB | Nmlp_3169 | Nmlp_3166 | Uncharacterized protein. | Acetolactate synthase large subunit. | 0.856 |
| Nmlp_3169 | ilvC | Nmlp_3169 | Nmlp_3168 | Uncharacterized protein. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.857 |
| Nmlp_3169 | ilvN | Nmlp_3169 | Nmlp_3167 | Uncharacterized protein. | Acetolactate synthase small subunit. | 0.857 |
| Nmlp_3169 | leuB | Nmlp_3169 | Nmlp_3172 | Uncharacterized protein. | 3-isopropylmalate dehydrogenase. | 0.619 |
| Nmlp_3169 | leuC | Nmlp_3169 | Nmlp_3170 | Uncharacterized protein. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.857 |
| Nmlp_3169 | leuD | Nmlp_3169 | Nmlp_3171 | Uncharacterized protein. | 3-isopropylmalate dehydratase small subunit. | 0.723 |
| ilvB | Nmlp_3169 | Nmlp_3166 | Nmlp_3169 | Acetolactate synthase large subunit. | Uncharacterized protein. | 0.856 |
| ilvB | ilvC | Nmlp_3166 | Nmlp_3168 | Acetolactate synthase large subunit. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.999 |
| ilvB | ilvD | Nmlp_3166 | Nmlp_1521 | Acetolactate synthase large subunit. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.992 |
| ilvB | ilvN | Nmlp_3166 | Nmlp_3167 | Acetolactate synthase large subunit. | Acetolactate synthase small subunit. | 0.999 |
| ilvB | korB2 | Nmlp_3166 | Nmlp_3098 | Acetolactate synthase large subunit. | Oxoglutarate--ferredoxin oxidoreductase beta subunit. | 0.914 |
| ilvB | leuA2 | Nmlp_3166 | Nmlp_1234 | Acetolactate synthase large subunit. | 2-isopropylmalate synthase / (R)-citramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.989 |
| ilvB | leuB | Nmlp_3166 | Nmlp_3172 | Acetolactate synthase large subunit. | 3-isopropylmalate dehydrogenase. | 0.989 |
| ilvB | leuC | Nmlp_3166 | Nmlp_3170 | Acetolactate synthase large subunit. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.961 |
| ilvB | leuD | Nmlp_3166 | Nmlp_3171 | Acetolactate synthase large subunit. | 3-isopropylmalate dehydratase small subunit. | 0.943 |
| ilvB | porB | Nmlp_3166 | Nmlp_3264 | Acetolactate synthase large subunit. | Pyruvate--ferredoxin oxidoreductase beta subunit. | 0.914 |
| ilvC | Nmlp_3169 | Nmlp_3168 | Nmlp_3169 | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | Uncharacterized protein. | 0.857 |
| ilvC | ilvB | Nmlp_3168 | Nmlp_3166 | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | Acetolactate synthase large subunit. | 0.999 |
| ilvC | ilvD | Nmlp_3168 | Nmlp_1521 | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.996 |
| ilvC | ilvN | Nmlp_3168 | Nmlp_3167 | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | Acetolactate synthase small subunit. | 0.999 |
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