Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ecaj_0899Surface antigen msp4. (283 aa)    
Predicted Functional Partners:
Ecaj_0900
Surface antigen msp4.
      
0.805
Ecaj_0901
Surface antigen msp4.
      
0.779
Ecaj_0898
Surface antigen msp4.
      
0.743
Ecaj_0902
Surface antigen msp4.
      
0.724
Ecaj_0897
Hypothetical protein.
       0.716
Ecaj_0904
Surface antigen msp4.
      
0.700
Ecaj_0903
Hypothetical protein.
       0.699
Ecaj_0906
Surface antigen msp4.
      
0.674
Ecaj_0905
Surface antigen msp4.
      
0.626
Ecaj_0907
Surface antigen msp4.
      
0.546
Your Current Organism:
Ehrlichia canis
NCBI taxonomy Id: 269484
Other names: E. canis str. Jake, Ehrlichia canis Jake, Ehrlichia canis str. Jake, Ehrlichia canis strain Jake
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