Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ecaj_0060 | proC | Ecaj_0060 | Ecaj_0941 | Hypothetical protein. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.690 |
Ecaj_0214 | Ecaj_0297 | Ecaj_0214 | Ecaj_0297 | Acetylornithine aminotransferase apoenzyme. | Conserved hypothetical protein. | 0.629 |
Ecaj_0214 | Ecaj_0375 | Ecaj_0214 | Ecaj_0375 | Acetylornithine aminotransferase apoenzyme. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.589 |
Ecaj_0214 | Ecaj_0411 | Ecaj_0214 | Ecaj_0411 | Acetylornithine aminotransferase apoenzyme. | Transcriptional regulator, BadM/Rrf2 family. | 0.495 |
Ecaj_0214 | Ecaj_0455 | Ecaj_0214 | Ecaj_0455 | Acetylornithine aminotransferase apoenzyme. | Putative 3-hydroxyacyl-CoA dehydrogenase. | 0.583 |
Ecaj_0214 | guaA | Ecaj_0214 | Ecaj_0074 | Acetylornithine aminotransferase apoenzyme. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.669 |
Ecaj_0214 | proC | Ecaj_0214 | Ecaj_0941 | Acetylornithine aminotransferase apoenzyme. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.521 |
Ecaj_0297 | Ecaj_0214 | Ecaj_0297 | Ecaj_0214 | Conserved hypothetical protein. | Acetylornithine aminotransferase apoenzyme. | 0.629 |
Ecaj_0297 | Ecaj_0375 | Ecaj_0297 | Ecaj_0375 | Conserved hypothetical protein. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.541 |
Ecaj_0297 | Ecaj_0411 | Ecaj_0297 | Ecaj_0411 | Conserved hypothetical protein. | Transcriptional regulator, BadM/Rrf2 family. | 0.671 |
Ecaj_0297 | Ecaj_0455 | Ecaj_0297 | Ecaj_0455 | Conserved hypothetical protein. | Putative 3-hydroxyacyl-CoA dehydrogenase. | 0.765 |
Ecaj_0297 | proC | Ecaj_0297 | Ecaj_0941 | Conserved hypothetical protein. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.652 |
Ecaj_0375 | Ecaj_0214 | Ecaj_0375 | Ecaj_0214 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Acetylornithine aminotransferase apoenzyme. | 0.589 |
Ecaj_0375 | Ecaj_0297 | Ecaj_0375 | Ecaj_0297 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Conserved hypothetical protein. | 0.541 |
Ecaj_0375 | proC | Ecaj_0375 | Ecaj_0941 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.969 |
Ecaj_0411 | Ecaj_0214 | Ecaj_0411 | Ecaj_0214 | Transcriptional regulator, BadM/Rrf2 family. | Acetylornithine aminotransferase apoenzyme. | 0.495 |
Ecaj_0411 | Ecaj_0297 | Ecaj_0411 | Ecaj_0297 | Transcriptional regulator, BadM/Rrf2 family. | Conserved hypothetical protein. | 0.671 |
Ecaj_0411 | proC | Ecaj_0411 | Ecaj_0941 | Transcriptional regulator, BadM/Rrf2 family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.503 |
Ecaj_0455 | Ecaj_0214 | Ecaj_0455 | Ecaj_0214 | Putative 3-hydroxyacyl-CoA dehydrogenase. | Acetylornithine aminotransferase apoenzyme. | 0.583 |
Ecaj_0455 | Ecaj_0297 | Ecaj_0455 | Ecaj_0297 | Putative 3-hydroxyacyl-CoA dehydrogenase. | Conserved hypothetical protein. | 0.765 |
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