Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KPM56751.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)    
Predicted Functional Partners:
KPM56752.1
Molybdopterin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.968
KPM51729.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.715
KPM57793.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.676
KPM54158.1
NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.667
KPM51878.1
1-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
  
 
 0.618
KPM56423.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.577
KPM56346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.537
KPM53943.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.531
KPM56750.1
Acetamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
KPM54885.1
Metal-sulfur cluster protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.496
Your Current Organism:
Frankia sp. R43
NCBI taxonomy Id: 269536
Other names: F. sp. R43
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