STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPM57073.1Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)    
Predicted Functional Partners:
KPM57072.1
Peptidase M75; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.998
KPM57071.1
Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.967
KPM56375.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.704
KPM53435.1
Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.671
KPM56473.1
Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.626
KPM51780.1
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.603
KPM54725.1
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.594
KPM57074.1
CopY family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.557
KPM55983.1
Toluene monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.548
KPM56213.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.538
Your Current Organism:
Frankia sp. R43
NCBI taxonomy Id: 269536
Other names: F. sp. R43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.