STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPM54246.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)    
Predicted Functional Partners:
KPM54247.1
Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
KPM54248.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
       0.768
KPM54245.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
KPM54503.1
NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
KPM54249.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.472
KPM54250.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.472
Your Current Organism:
Frankia sp. R43
NCBI taxonomy Id: 269536
Other names: F. sp. R43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.