STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPM54522.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (513 aa)    
Predicted Functional Partners:
KPM55370.1
Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
  0.780
KPM54458.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.718
KPM54293.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.692
KPM55124.1
Copper resistance protein CopC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.669
KPM56346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.638
KPM53943.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.638
KPM52338.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.638
KPM52125.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.638
KPM51729.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.638
KPM52791.1
Copper resistance protein CopC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.596
Your Current Organism:
Frankia sp. R43
NCBI taxonomy Id: 269536
Other names: F. sp. R43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.