STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPM52896.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)    
Predicted Functional Partners:
KPM53200.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.820
KPM52897.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.815
KPM52898.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.802
KPM52540.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.686
KPM50439.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.654
KPM53598.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.580
KPM54395.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.566
KPM50741.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.531
KPM53862.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.502
KPM52484.1
Acyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.502
Your Current Organism:
Frankia sp. R43
NCBI taxonomy Id: 269536
Other names: F. sp. R43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.