KPM51441.1 protein (Frankia sp. R43) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

KPM51441.1

Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)

Predicted Functional Partners:

KPM51538.1

0.953

KPM51442.1

0.943

KPM51443.1

0.923

KPM51444.1

0.904

KPM51440.1

0.835

KPM51439.1

0.795

KPM57786.1

0.659

purD

0.627

egtD

0.625

KPM53079.1

0.536

Your Current Organism:

Frankia sp. R43

NCBI taxonomy Id: 269536
Other names: F. sp. R43

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KPM51439.1	KPM51440.1	ACG83_35585	ACG83_35590	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
KPM51439.1	KPM51441.1	ACG83_35585	ACG83_35595	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
KPM51439.1	KPM51442.1	ACG83_35585	ACG83_35605	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
KPM51439.1	KPM51443.1	ACG83_35585	ACG83_35610	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
KPM51439.1	KPM51444.1	ACG83_35585	ACG83_35615	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.765
KPM51439.1	KPM51538.1	ACG83_35585	ACG83_35600	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.508
KPM51440.1	KPM51439.1	ACG83_35590	ACG83_35585	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
KPM51440.1	KPM51441.1	ACG83_35590	ACG83_35595	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
KPM51440.1	KPM51442.1	ACG83_35590	ACG83_35605	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.786
KPM51440.1	KPM51443.1	ACG83_35590	ACG83_35610	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.780
KPM51440.1	KPM51444.1	ACG83_35590	ACG83_35615	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.765
KPM51440.1	KPM51538.1	ACG83_35590	ACG83_35600	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.546
KPM51441.1	KPM51439.1	ACG83_35595	ACG83_35585	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
KPM51441.1	KPM51440.1	ACG83_35595	ACG83_35590	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
KPM51441.1	KPM51442.1	ACG83_35595	ACG83_35605	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.943
KPM51441.1	KPM51443.1	ACG83_35595	ACG83_35610	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
KPM51441.1	KPM51444.1	ACG83_35595	ACG83_35615	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
KPM51441.1	KPM51538.1	ACG83_35595	ACG83_35600	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KPM51441.1	KPM53079.1	ACG83_35595	ACG83_27210	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
KPM51441.1	KPM57786.1	ACG83_35595	ACG83_06600	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.659