STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPM50841.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (642 aa)    
Predicted Functional Partners:
KPM53311.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
KPM50840.1
Acetophenone carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
KPM50837.1
Acetone carboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.985
KPM56490.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.834
KPM50839.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.832
glsA
Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family.
    
 0.798
KPM51878.1
1-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
  
 
  0.642
KPM56395.1
Carbamoylsarcosine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.526
KPM54122.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.489
KPM50740.1
Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.484
Your Current Organism:
Frankia sp. R43
NCBI taxonomy Id: 269536
Other names: F. sp. R43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.