STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5093BQ2448_5093 protein. (415 aa)    
Predicted Functional Partners:
BQ2448_5938
BQ2448_5938 protein.
   
 0.999
BQ2448_5094
BQ2448_5094 protein.
   
 0.999
BQ2448_1129
BQ2448_1129 protein.
   
 0.999
BQ2448_2231
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
BQ2448_4616
Proteasome subunit alpha type.
   
 0.999
BQ2448_2538
BQ2448_2538 protein; Belongs to the AAA ATPase family.
 
 
 0.999
BQ2448_3733
BQ2448_3733 protein.
   
 0.999
BQ2448_4493
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.999
BQ2448_2776
BQ2448_2776 protein; Belongs to the AAA ATPase family.
 
 
 0.999
BQ2448_6484
BQ2448_6484 protein.
   
 0.999
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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