STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5943BQ2448_5943 protein. (944 aa)    
Predicted Functional Partners:
BQ2448_7415
BQ2448_7415 protein.
    
   0.891
BQ2448_5942
BQ2448_5942 protein.
 
  
   0.742
BQ2448_4376
BQ2448_4376 protein.
    
 
 0.722
BQ2448_7457
BQ2448_7457 protein.
    
 
 0.707
BQ2448_2317
BQ2448_2317 protein.
    
 
 0.579
BQ2448_1018
BQ2448_1018 protein.
    
   0.553
BQ2448_2711
BQ2448_2711 protein.
   
 
 0.548
BQ2448_4158
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.527
BQ2448_7892
BQ2448_7892 protein.
   
   0.527
BQ2448_5443
BQ2448_5443 protein.
   
 
 0.519
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.