STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5953BQ2448_5953 protein. (537 aa)    
Predicted Functional Partners:
BQ2448_4122
BQ2448_4122 protein; Belongs to the cytochrome P450 family.
   
 0.983
BQ2448_7411
BQ2448_7411 protein; Belongs to the cytochrome P450 family.
  
 0.981
BQ2448_517
BQ2448_517 protein.
  
 
 0.980
BQ2448_1873
BQ2448_1873 protein.
   
 
 0.978
BQ2448_8007
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.977
BQ2448_7368
BQ2448_7368 protein.
   
 
 0.976
BQ2448_6503
BQ2448_6503 protein.
   
 
 0.973
BQ2448_5704
BQ2448_5704 protein.
   
 
 0.968
BQ2448_5051
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
  
 0.941
BQ2448_5071
BQ2448_5071 protein.
   
 
 0.929
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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