STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5238BQ2448_5238 protein. (475 aa)    
Predicted Functional Partners:
BQ2448_2502
BQ2448_2502 protein.
    
 0.794
BQ2448_6993
BQ2448_6993 protein.
    
 0.752
BQ2448_2411
BQ2448_2411 protein.
    
 0.751
BQ2448_2617
BQ2448_2617 protein.
    
   0.715
BQ2448_4994
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.690
BQ2448_7568
BQ2448_7568 protein.
    
 0.651
BQ2448_4030
BQ2448_4030 protein.
    
   0.648
BQ2448_8135
BQ2448_8135 protein.
    
 0.630
BQ2448_2270
BQ2448_2270 protein; Belongs to the DEAD box helicase family.
    
  0.629
BQ2448_7819
BQ2448_7819 protein.
   
  0.627
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.