STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5340BQ2448_5340 protein. (387 aa)    
Predicted Functional Partners:
BQ2448_3489
BQ2448_3489 protein.
     
 0.935
BQ2448_4277
BQ2448_4277 protein.
    
 0.900
BQ2448_7508
BQ2448_7508 protein; Belongs to the dihydrofolate reductase family.
  
 
 0.878
BQ2448_7162
BQ2448_7162 protein.
  
 
 0.864
BQ2448_3213
BQ2448_3213 protein.
   
 0.840
BQ2448_320
BQ2448_320 protein.
  
 0.813
BQ2448_1104
BQ2448_1104 protein.
    
  0.812
BQ2448_1326
BQ2448_1326 protein.
    
  0.812
BQ2448_4020
BQ2448_4020 protein.
  
  0.795
BQ2448_7724
BQ2448_7724 protein.
   
  0.789
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.