STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_316BQ2448_316 protein. (1062 aa)    
Predicted Functional Partners:
BQ2448_4230
BQ2448_4230 protein.
   
 0.974
BQ2448_2901
BQ2448_2901 protein; Belongs to the argonaute family.
   
 0.702
BQ2448_2954
BQ2448_2954 protein; Belongs to the argonaute family.
   
 0.702
BQ2448_1378
Nuclear cap-binding protein subunit 2.
   
    0.503
BQ2448_3831
BQ2448_3831 protein.
   
    0.470
BQ2448_6175
BQ2448_6175 protein.
   
    0.465
BQ2448_2670
BQ2448_2670 protein.
   
  
 0.464
BQ2448_6434
BQ2448_6434 protein.
   
  
 0.464
BQ2448_5571
BQ2448_5571 protein.
    
   0.454
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.