STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5897BQ2448_5897 protein. (388 aa)    
Predicted Functional Partners:
BQ2448_3844
BQ2448_3844 protein.
  
 0.823
BQ2448_5339
BQ2448_5339 protein.
    
 0.653
BQ2448_7073
BQ2448_7073 protein.
    
 0.653
BQ2448_8010
BQ2448_8010 protein.
    
 0.653
BQ2448_2701
BQ2448_2701 protein; Belongs to the TPP enzyme family.
   
 
 0.626
BQ2448_3351
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
0.611
BQ2448_7870
BQ2448_7870 protein.
    
0.611
BQ2448_5810
BQ2448_5810 protein.
   
 
  0.563
BQ2448_2159
BQ2448_2159 protein.
   
 
  0.563
BQ2448_1043
Threonine dehydratase.
   
 
  0.563
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.