STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5880BQ2448_5880 protein. (848 aa)    
Predicted Functional Partners:
BQ2448_749
BQ2448_749 protein; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.705
BQ2448_4030
BQ2448_4030 protein.
   
 
 0.704
BQ2448_4019
BQ2448_4019 protein.
    
 
 0.683
BQ2448_6159
BQ2448_6159 protein.
    
 
 0.675
BQ2448_3860
BQ2448_3860 protein.
    
 
 0.636
BQ2448_4638
BQ2448_4638 protein.
 
      0.628
BQ2448_2510
BQ2448_2510 protein.
    
 
 0.625
BQ2448_6325
BQ2448_6325 protein.
    
 
 0.622
BQ2448_2617
BQ2448_2617 protein.
   
 
 0.574
BQ2448_1808
BQ2448_1808 protein; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.569
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.