STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_686BQ2448_686 protein. (55 aa)    
Predicted Functional Partners:
BQ2448_1225
BQ2448_1225 protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.738
BQ2448_5092
BQ2448_5092 protein.
   
 0.559
BQ2448_6679
BQ2448_6679 protein.
   
 0.559
BQ2448_5493
BQ2448_5493 protein.
   
 
 0.498
BQ2448_1629
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.481
BQ2448_5686
BQ2448_5686 protein.
    
   0.478
BQ2448_5251
BQ2448_5251 protein; Belongs to the universal ribosomal protein uS5 family.
    
   0.478
BQ2448_5690
BQ2448_5690 protein.
    
   0.478
BQ2448_5427
BQ2448_5427 protein.
    
   0.478
BQ2448_79
BQ2448_79 protein.
    
   0.478
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.