STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_6019BQ2448_6019 protein. (1487 aa)    
Predicted Functional Partners:
BQ2448_5228
BQ2448_5228 protein.
   
  
 0.976
BQ2448_7879
Tryptophan synthase.
  
 
 0.958
BQ2448_3589
BQ2448_3589 protein.
  
 0.951
BQ2448_3590
BQ2448_3590 protein.
  
 0.951
BQ2448_7231
BQ2448_7231 protein; Belongs to the membrane-bound acyltransferase family.
  
  
 0.915
BQ2448_1193
BQ2448_1193 protein.
  
 0.888
BQ2448_4537
BQ2448_4537 protein.
  
 0.869
BQ2448_5772
BQ2448_5772 protein.
  
 0.840
BQ2448_4718
BQ2448_4718 protein.
  
 0.814
BQ2448_2860
BQ2448_2860 protein.
  
 0.790
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.