STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5092BQ2448_5092 protein. (243 aa)    
Predicted Functional Partners:
BQ2448_141
BQ2448_141 protein.
   
 0.999
BQ2448_411
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.999
BQ2448_5186
BQ2448_5186 protein; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.999
BQ2448_5130
BQ2448_5130 protein.
  
 0.999
BQ2448_128
BQ2448_128 protein.
   
 0.999
BQ2448_408
BQ2448_408 protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
BQ2448_5780
BQ2448_5780 protein.
  
 0.999
BQ2448_1294
BQ2448_1294 protein; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.999
BQ2448_2385
BQ2448_2385 protein.
   
 0.999
BQ2448_502
BQ2448_502 protein.
   
 0.999
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.