STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5172BQ2448_5172 protein. (321 aa)    
Predicted Functional Partners:
BQ2448_2138
BQ2448_2138 protein.
   
 
 0.813
BQ2448_6142
Prohibitin.
   
 0.807
BQ2448_2965
Prohibitin.
   
 0.699
BQ2448_3930
BQ2448_3930 protein.
   
 0.652
BQ2448_6331
BQ2448_6331 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.652
BQ2448_760
BQ2448_760 protein; Belongs to the AAA ATPase family.
   
 
 0.584
BQ2448_762
BQ2448_762 protein.
   
 
 0.584
BQ2448_623
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.537
BQ2448_7930
BQ2448_7930 protein.
   
 
 0.525
BQ2448_379
BQ2448_379 protein.
     
 0.491
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.