STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_908BQ2448_908 protein. (329 aa)    
Predicted Functional Partners:
BQ2448_1988
BQ2448_1988 protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.983
BQ2448_7670
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.970
BQ2448_6314
BQ2448_6314 protein; Belongs to the universal ribosomal protein uL23 family.
   
   0.965
BQ2448_5780
BQ2448_5780 protein.
   
   0.964
BQ2448_6561
BQ2448_6561 protein.
   
   0.963
BQ2448_4251
BQ2448_4251 protein; Belongs to the universal ribosomal protein uS17 family.
   
   0.961
BQ2448_2721
BQ2448_2721 protein; Belongs to the universal ribosomal protein uL22 family.
   
   0.959
BQ2448_399
BQ2448_399 protein; Belongs to the universal ribosomal protein uL14 family.
   
   0.956
BQ2448_3686
BQ2448_3686 protein; Belongs to the universal ribosomal protein uS7 family.
   
   0.956
BQ2448_141
BQ2448_141 protein.
   
   0.953
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.