STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_2560BQ2448_2560 protein. (613 aa)    
Predicted Functional Partners:
BQ2448_4572
BQ2448_4572 protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.993
BQ2448_5068
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.991
BQ2448_2736
BQ2448_2736 protein; Belongs to the RecA family.
   
 
 0.954
BQ2448_4744
BQ2448_4744 protein.
   
 
 0.950
BQ2448_7732
BQ2448_7732 protein.
    
 
 0.943
BQ2448_3744
BQ2448_3744 protein.
   
 0.926
BQ2448_846
DNA polymerase.
    
 0.917
BQ2448_2599
BQ2448_2599 protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.912
BQ2448_3592
BQ2448_3592 protein.
    
 0.892
BQ2448_3675
BQ2448_3675 protein.
    
 0.892
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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