STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5185Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (304 aa)    
Predicted Functional Partners:
BQ2448_7717
BQ2448_7717 protein.
   
 
 0.926
BQ2448_6354
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
 
0.911
BQ2448_4500
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.892
BQ2448_2234
BQ2448_2234 protein.
 
      0.875
BQ2448_2618
BQ2448_2618 protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.608
BQ2448_7955
BQ2448_7955 protein.
   
 
 0.582
BQ2448_4897
BQ2448_4897 protein.
 
  
 
 0.499
BQ2448_131
BQ2448_131 protein.
      
 0.497
BQ2448_4630
BQ2448_4630 protein.
   
  
 0.488
BQ2448_2042
BQ2448_2042 protein.
   
 
 0.443
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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