STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5444BQ2448_5444 protein. (362 aa)    
Predicted Functional Partners:
BQ2448_2898
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.999
BQ2448_3308
BQ2448_3308 protein.
    
 0.999
BQ2448_4215
BQ2448_4215 protein.
    
 0.999
BQ2448_1339
BQ2448_1339 protein.
   
 0.998
BQ2448_5777
BQ2448_5777 protein.
    
 0.970
BQ2448_3619
BQ2448_3619 protein.
    
 0.929
BQ2448_3618
BQ2448_3618 protein.
    
 0.929
BQ2448_3798
BQ2448_3798 protein.
    
 0.929
BQ2448_3817
Structural maintenance of chromosomes protein.
    
 0.850
BQ2448_1846
Structural maintenance of chromosomes protein.
    
 0.849
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.