STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_1454BQ2448_1454 protein. (1975 aa)    
Predicted Functional Partners:
BQ2448_5931
BQ2448_5931 protein.
    
  0.813
BQ2448_7948
BQ2448_7948 protein.
    
  0.813
BQ2448_3592
BQ2448_3592 protein.
    
  0.800
BQ2448_3675
BQ2448_3675 protein.
    
  0.800
BQ2448_6886
BQ2448_6886 protein.
    
  0.791
BQ2448_6376
BQ2448_6376 protein.
    
  0.791
BQ2448_1051
BQ2448_1051 protein.
    
 0.785
BQ2448_2101
BQ2448_2101 protein.
    
 0.744
BQ2448_1622
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.726
BQ2448_2599
BQ2448_2599 protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.700
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.